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Super-enhancer overview

SE ID: SE_02_068100508
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: H1 hESC-derived neural progenitor cells_Smad_72hr
Genomic region: chr6:34223466-34235464
Size: 11998
Super-enhancer rank 508
Number of SE elements: 4
ChIP density(Case|Control): 4716.4138|1079.82
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HMGA1;
ROSE Overlap ;
ROSE Proximal HMGA1; MIR6835; C6orf1;
ROSE Closest HMGA1;
Lasso ;
PreSTIGE HMGA1;

Network diagram of super-enhancer and associated genes

Expression of SE_02_068100508 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers