SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066101065
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr5:150004540-150024731
Size: 20191
Super-enhancer rank 1065
Number of SE elements: 6
ChIP density(Case|Control): 12322.5673|4022.0472
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TIGD6 ;
ROSE Overlap HMGXB3 ;
ROSE Proximal SLC26A2 ; TIGD6 ;
ROSE Closest TIGD6 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HMGXB3 ; LOC644762 ; TIGD6 ; SLC26A2 ; CSF1R ; PDE6A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066101065 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers