SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066100989
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr2:177161943-177171965
Size: 10022
Super-enhancer rank 989
Number of SE elements: 4
ChIP density(Case|Control): 10547.1528|1844.048
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPA3 ;
ROSE Overlap ;
ROSE Proximal HNRNPA3 ; MIR4444-1 ;
ROSE Closest HNRNPA3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NFE2L2 ; HNRNPA3 ; MIR3128 ; MIR4444-1 ; MIR4444-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100989 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers