SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066100947
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr1:201395889-201400290
Size: 4401
Super-enhancer rank 947
Number of SE elements: 2
ChIP density(Case|Control): 11371.3038|2391.9435
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LAD1 ;
ROSE Overlap LAD1 ;
ROSE Proximal TNNT2 ; TNNI1 ;
ROSE Closest LAD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TNNI1 ; PHLDA3 ; CSRP1 ; LAD1 ; TNNT2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100947 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers