SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066100884
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr9:94133574-94140988
Size: 7414
Super-enhancer rank 884
Number of SE elements: 3
ChIP density(Case|Control): 10788.1114|1386.418
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIRLET7A1 ;
ROSE Overlap ;
ROSE Proximal PTPDC1 ; MIRLET7A1 ; MIRLET7D ; MIRLET7F1 ;
ROSE Closest MIRLET7A1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIRLET7F1 ; PTPDC1 ; MIRLET7DHG ; MIRLET7D ; MIRLET7A1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100884 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers