SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_066100820
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr19:39430400-39440908
Size: 10508
Super-enhancer rank 820
Number of SE elements: 3
ChIP density(Case|Control): 14421.1792|4478.5096
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPS16;
ROSE Overlap RPS16;
ROSE Proximal TIMM50; ZFP36; PLEKHG2; SUPT5H; MED29; PAF1; MIR4530;
ROSE Closest RPS16;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100820 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers