SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066100672
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr9:128887971-128927944
Size: 39973
Super-enhancer rank 672
Number of SE elements: 14
ChIP density(Case|Control): 20949.8493|9585.5254
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHYHD1 ;
ROSE Overlap LRRC8A ; PHYHD1 ;
ROSE Proximal CCBL1 ; NUP188 ; PHYHD1 ; DOLK ;
ROSE Closest PHYHD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ENDOG ; PHYHD1 ; CCBL1 ; LRRC8A ; DOLK ; C9orf114 ; NUP188 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100672 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers