SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066100661
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr17:63837571-63842732
Size: 5161
Super-enhancer rank 661
Number of SE elements: 3
ChIP density(Case|Control): 14387.8358|2919.5777
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMARCD2 ;
ROSE Overlap SMARCD2 ;
ROSE Proximal CSH2 ; PSMC5 ; GH2 ; TCAM1P ; FTSJ3 ;
ROSE Closest SMARCD2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA STRADA ; CD79B ; GH1 ; CSHL1 ; CSH1 ; DDX42 ; GH2 ; PSMC5 ; CSH2 ; TCAM1P ; CCDC47 ; FTSJ3 ; SMARCD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100661 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers