SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066100567
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr2:218282207-218301356
Size: 19149
Super-enhancer rank 567
Number of SE elements: 15
ChIP density(Case|Control): 17856.4425|5288.9538
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMBIM1 ;
ROSE Overlap PNKD ; TMBIM1 ;
ROSE Proximal AAMP ; MIR6810 ; GPBAR1 ; PNKD ; MIR6513 ;
ROSE Closest TMBIM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GPBAR1 ; MIR6810 ; AAMP ; PNKD ; SLC11A1 ; CATIP ; CATIP-AS2 ; ARPC2 ; TMBIM1 ; MIR6513 ; CATIP-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100567 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers