SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066100506
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr19:35114795-35120013
Size: 5218
Super-enhancer rank 506
Number of SE elements: 1
ChIP density(Case|Control): 16010.3894|2509.858
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FXYD3 ;
ROSE Overlap FXYD3 ;
ROSE Proximal FXYD1 ; FXYD5 ; FXYD3 ; FXYD7 ; MIR6887 ; HPN-AS1 ; LGI4 ;
ROSE Closest FXYD3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FXYD1 ; FXYD3 ; FXYD7 ; FXYD5 ; SCN1B ; HPN-AS1 ; MIR6887 ; HPN ; LGI4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100506 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers