SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_066100366
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr1:235060604-235083697
Size: 23093
Super-enhancer rank 366
Number of SE elements: 11
ChIP density(Case|Control): 24753.3867|8943.9189
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01348 ;
ROSE Overlap LINC01348 ;
ROSE Proximal SNORA14B ; TOMM20 ;
ROSE Closest LINC01348 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RBM34 ; LINC01348 ; TOMM20 ; SNORA14B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100366 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers