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Super-enhancer overview

SE ID: SE_02_066100321
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr5:141508426-141534781
Size: 26355
Super-enhancer rank 321
Number of SE elements: 11
ChIP density(Case|Control): 24391.5525|7279.251
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PCDHGC5;
ROSE Overlap PCDHGB5; PCDHGB1; PCDHGC4; PCDHGA1; PCDHGA6; PCDHGB2; PCDHGA2; PCDHGA4; PCDHGB3; PCDHGC3; PCDHGA3; PCDHGA11; PCDHGA8; PCDHGA10; PCDHGA12; PCDHGA9; PCDHGB6; PCDHGA7; PCDHGC5; PCDHGB7; DIAPH1; PCDHGA5; PCDHGB4;
ROSE Proximal PCDHGC5; PCDHGC3; LOC100505658; PCDHGC4;
ROSE Closest PCDHGC5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100321 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers