SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_066100056
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mammary gland
Biosample name: MCF10DCIS-TetTCF7
Genomic region: chr11:1817143-1844079
Size: 26936
Super-enhancer rank 56
Number of SE elements: 9
ChIP density(Case|Control): 48436.3152|9002.0112
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SYT8 ;
ROSE Overlap TNNI2 ; SYT8 ;
ROSE Proximal LSP1 ; MIR4298 ; SYT8 ; MIR7847 ;
ROSE Closest SYT8 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LSP1 ; TNNT3 ; TNNI2 ; IFITM10 ; SYT8 ; MIR4298 ; CTSD ; MIR7847 ; LINC01150 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_066100056 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers