SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_065900251
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Lung
Biosample name: H23
Genomic region: chr1:161113199-161121959
Size: 8760
Super-enhancer rank 251
Number of SE elements: 1
ChIP density(Case|Control): 55261.584|2105.028
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NIT1 ;
ROSE Overlap DEDD ; PFDN2 ; NIT1 ;
ROSE Proximal DEDD ; ARHGAP30 ; KLHDC9 ; PPOX ; USP21 ; PVRL4 ; UFC1 ;
ROSE Closest NIT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA USP21 ; USF1 ; NIT1 ; DEDD ; UFC1 ; PPOX ; TSTD1 ; NDUFS2 ; PVRL4 ; FCER1G ; F11R ; ARHGAP30 ; KLHDC9 ; ADAMTS4 ; B4GALT3 ; PFDN2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_065900251 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers