SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_064200498
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MDA-MB-436_20C paclitaxel
Genomic region: chr9:120874495-120878190
Size: 3695
Super-enhancer rank 498
Number of SE elements: 2
ChIP density(Case|Control): 24050.3855|582.7015
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PHF19;
ROSE Overlap PHF19;
ROSE Proximal PSMD5-AS1; PHF19; TRAF1; PSMD5;
ROSE Closest PHF19;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_064200498 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers