SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_063300465
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_Imatinib
Genomic region: chr3:129587224-129600057
Size: 12833
Super-enhancer rank 465
Number of SE elements: 4
ChIP density(Case|Control): 14765.6498|767.4134
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLXND1;
ROSE Overlap PLXND1;
ROSE Proximal H1FOO;
ROSE Closest PLXND1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063300465 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers