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Super-enhancer overview

SE ID: SE_02_063300452
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_Imatinib
Genomic region: chr17:42673669-42681897
Size: 8228
Super-enhancer rank 452
Number of SE elements: 2
ChIP density(Case|Control): 15081.924|807.1668
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLEKHH3;
ROSE Overlap PLEKHH3; CCR10;
ROSE Proximal CNTNAP1; MIR6780A; TUBG2;
ROSE Closest PLEKHH3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063300452 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers