SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_063300400
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_Imatinib
Genomic region: chr9:129137693-129147310
Size: 9617
Super-enhancer rank 400
Number of SE elements: 2
ChIP density(Case|Control): 16645.1036|933.8107
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP2R4;
ROSE Overlap PPP2R4;
ROSE Proximal IER5L; CRAT;
ROSE Closest PPP2R4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063300400 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers