SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_063300395
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_Imatinib
Genomic region: chr5:177470205-177501006
Size: 30801
Super-enhancer rank 395
Number of SE elements: 6
ChIP density(Case|Control): 18606.8841|2710.488
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DBN1;
ROSE Overlap DBN1; PDLIM7;
ROSE Proximal DOK3; PRR7; DDX41; PRR7-AS1; GRK6;
ROSE Closest DBN1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063300395 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers