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Super-enhancer overview

SE ID: SE_02_063300325
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_Imatinib
Genomic region: chr16:2468508-2503246
Size: 34738
Super-enhancer rank 325
Number of SE elements: 6
ChIP density(Case|Control): 21468.084|3928.8678
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D24;
ROSE Overlap NTN3; TBC1D24;
ROSE Proximal CEMP1; CCNF; MIR3178; C16orf59; TBC1D24; PDPK1; ATP6V0C; MIR6768; MIR6767; AMDHD2;
ROSE Closest TBC1D24;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063300325 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers