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Super-enhancer overview

SE ID: SE_02_063300280
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_Imatinib
Genomic region: chr12:54338803-54379716
Size: 40913
Super-enhancer rank 280
Number of SE elements: 9
ChIP density(Case|Control): 23238.584|4287.6824
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPR84;
ROSE Overlap ZNF385A; COPZ1; LOC102724050; GPR84;
ROSE Proximal COPZ1; ITGA5; NFE2; LOC102724050; MIR148B;
ROSE Closest GPR84;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063300280 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers