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Super-enhancer overview

SE ID: SE_02_063300082
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_Imatinib
Genomic region: chr19:18278913-18307907
Size: 28994
Super-enhancer rank 82
Number of SE elements: 4
ChIP density(Case|Control): 38109.7136|2986.382
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3188;
ROSE Overlap LSM4; MIR3188; JUND;
ROSE Proximal PDE4C; JUND; PGPEP1; LOC729966; KIAA1683;
ROSE Closest MIR3188;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063300082 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers