SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_063300011
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_Imatinib
Genomic region: chr1:172340438-172402075
Size: 61637
Super-enhancer rank 11
Number of SE elements: 10
ChIP density(Case|Control): 90156.4399|9442.7884
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C1ORF105;
ROSE Overlap DNM3;
ROSE Proximal PIGC; C1orf105;
ROSE Closest C1orf105;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063300011 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers