SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_063200422
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-48B_DMSO
Genomic region: chr19:46373709-46426767
Size: 53058
Super-enhancer rank 422
Number of SE elements: 13
ChIP density(Case|Control): 17965.4388|3931.5978
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC8;
ROSE Overlap PPP5C; CCDC8;
ROSE Proximal PPP5C; PNMAL1;
ROSE Closest CCDC8;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063200422 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers