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Super-enhancer overview

SE ID: SE_02_061900476
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Head and Neck
Biosample name: HPV+ HNSCC_SCC-047
Genomic region: chr20:45334706-45362300
Size: 27594
Super-enhancer rank 476
Number of SE elements: 5
ChIP density(Case|Control): 19130.9202|2163.3696
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SDC4;
ROSE Overlap SDC4; SYS1;
ROSE Proximal SYS1-DBNDD2; MATN4; SYS1; DBNDD2; RBPJL; TP53TG5;
ROSE Closest SDC4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_061900476 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers