SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_060600401
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Skin
Biosample name: Skin Fibroblast_Nutlin3A
Genomic region: chr3:54950658-54971100
Size: 20442
Super-enhancer rank 401
Number of SE elements: 9
ChIP density(Case|Control): 34929.2454|4515.6378
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LRTM1;
ROSE Overlap LRTM1; CACNA2D3;
ROSE Proximal LRTM1; CACNA2D3-AS1;
ROSE Closest LRTM1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060600401 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers