SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_060400165
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_scrshRNA_DMSO
Genomic region: chr1:26848781-26866113
Size: 17332
Super-enhancer rank 165
Number of SE elements: 4
ChIP density(Case|Control): 33147.45|2724.5904
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SFN;
ROSE Overlap ZDHHC18; SFN;
ROSE Proximal NR0B2; GPN2; GPATCH3;
ROSE Closest SFN;
Lasso SFN; NUDC; GPN2; NR0B2; GPATCH3; ZDHHC18;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060400165 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers