SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_060400125
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_scrshRNA_DMSO
Genomic region: chr22:46064030-46075300
Size: 11270
Super-enhancer rank 125
Number of SE elements: 1
ChIP density(Case|Control): 36029.063|1728.818
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRR34;
ROSE Overlap ;
ROSE Proximal PRR34; MIR3619; LINC00899; PRR34-AS1; MIRLET7BHG; MIRLET7A3; MIR4763; MIRLET7B;
ROSE Closest PRR34;
Lasso PRR34;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060400125 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers