SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_060400116
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_scrshRNA_DMSO
Genomic region: chr2:55760188-55781413
Size: 21225
Super-enhancer rank 116
Number of SE elements: 6
ChIP density(Case|Control): 37712.58|3001.215
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PNPT1;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest PNPT1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060400116 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers