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Super-enhancer overview

SE ID: SE_02_060400054
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_scrshRNA_DMSO
Genomic region: chr11:65472525-65508132
Size: 35607
Super-enhancer rank 54
Number of SE elements: 17
ChIP density(Case|Control): 55846.0188|7107.1572
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MALAT1;
ROSE Overlap MALAT1;
ROSE Proximal SCYL1; NEAT1; MIR612;
ROSE Closest MALAT1;
Lasso EHBP1L1; LTBP3; SLC25A45; DPF2; CDC42EP2; SCYL1; FRMD8; KCNK7; FAM89B;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060400054 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers