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Super-enhancer overview

SE ID: SE_02_060300139
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_Nutlin3A
Genomic region: chr1:26848427-26879010
Size: 30583
Super-enhancer rank 139
Number of SE elements: 6
ChIP density(Case|Control): 60762.3044|4939.1545
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SFN;
ROSE Overlap ZDHHC18; SFN;
ROSE Proximal GPATCH3; NUDC; GPN2; NR0B2;
ROSE Closest SFN;
Lasso SFN; NUDC; GPN2; NR0B2; GPATCH3; ZDHHC18;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060300139 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers