SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200651
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr11:111938227-111947240
Size: 9013
Super-enhancer rank 651
Number of SE elements: 5
ChIP density(Case|Control): 22262.11|2223.5071
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DIXDC1 ;
ROSE Overlap DIXDC1 ;
ROSE Proximal C11orf52 ; CRYAB ; DIXDC1 ; HSPB2 ;
ROSE Closest DIXDC1 ;
Lasso ;
PreSTIGE ;
ABC C11orf57 ; PIH1D2 ;
BETA C11orf52 ; CRYAB ; HSPB2-C11orf52 ; C11orf1 ; ALG9 ; DIXDC1 ; FDXACB1 ; HSPB2 ; DLAT ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200651 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers