SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_060200642
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr10:99775380-99789269
Size: 13889
Super-enhancer rank 642
Number of SE elements: 5
ChIP density(Case|Control): 22269.6226|2152.795
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ABCC2 ;
ROSE Overlap ABCC2 ;
ROSE Proximal CUTC ; COX15 ;
ROSE Closest ABCC2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ABCC2 ; COX15 ; CUTC ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200642 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers