SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200641
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr13:41136261-41146328
Size: 10067
Super-enhancer rank 641
Number of SE elements: 2
ChIP density(Case|Control): 21945.0533|1826.1538
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC101929140 ;
ROSE Overlap LOC101929140 ;
ROSE Proximal MIR3168 ; KBTBD6 ; KBTBD7 ;
ROSE Closest LOC101929140 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KBTBD6 ; MIR3168 ; KBTBD7 ; WBP4 ; LOC101929140 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200641 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers