SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_060200603
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr12:12871778-12904577
Size: 32799
Super-enhancer rank 603
Number of SE elements: 7
ChIP density(Case|Control): 26435.994|5513.5119
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPRC5A;
ROSE Overlap RPL13AP20; GPRC5A;
ROSE Proximal MIR614; GPRC5D;
ROSE Closest GPRC5A;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200603 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers