SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200530
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr19:4052056-4065882
Size: 13826
Super-enhancer rank 530
Number of SE elements: 3
ChIP density(Case|Control): 28463.5862|5866.3718
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZBTB7A ;
ROSE Overlap ZBTB7A ;
ROSE Proximal PIAS4 ;
ROSE Closest ZBTB7A ;
Lasso ;
PreSTIGE ;
ABC EBI3 ; ANKRD24 ; SIRT6 ; MAP2K2 ; ZBTB7A ; PIAS4 ; EEF2 ; DAPK3 ;
BETA SNORD37 ; DAPK3 ; MAP2K2 ; MIR637 ; PIAS4 ; CREB3L3 ; ZBTB7A ; EEF2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200530 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers