SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200524
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr1:231383340-231423472
Size: 40132
Super-enhancer rank 524
Number of SE elements: 15
ChIP density(Case|Control): 32771.7912|9928.6568
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EGLN1 ;
ROSE Overlap EGLN1 ;
ROSE Proximal EXOC8 ; SPRTN ;
ROSE Closest EGLN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNRPD2P2 ; SPRTN ; EGLN1 ; EXOC8 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200524 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers