SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_060200514
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr12:14810840-14844028
Size: 33188
Super-enhancer rank 514
Number of SE elements: 5
ChIP density(Case|Control): 26357.9096|3278.9744
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SMCO3;
ROSE Overlap C12orf60; ART4; SMCO3;
ROSE Proximal HIST4H4; H2AFJ; WBP11; MGP;
ROSE Closest SMCO3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200514 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers