Super-enhancer overview
| SE ID: | SE_02_060200500 |
| Species: | Human |
| Data source: | NCBI GEO/SRA |
| Biosample type: | Cell line |
| Tissue type: | Mammary gland |
| Biosample name: | MCF10A_p63shRNA_DMSO |
| Genomic region: | chr9:35905340-35909495 |
| Size: | 4155 |
| Super-enhancer rank | 500 |
| Number of SE elements: | 1 |
| ChIP density(Case|Control): | 24637.0725|1309.656 |
| Genome browser: | 
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Super-enhancer annotation
eQTL
eRNA1~5
5~10
10~MAX
Super-enhancer associated genes
| Strategies/Algorithm | Gene name |
| The closest active: | HRCT1 ; |
| ROSE Overlap | HRCT1 ; LINC00961 ; |
| ROSE Proximal | LINC00950 ; OR2S2 ; OR13J1 ; |
| ROSE Closest | HRCT1 ; |
| Lasso | ; |
| PreSTIGE | ; |
| ABC | HRCT1 ; LINC00961 ; SPAAR ; CREB3 ; TLN1 ; GBA2 ; RGP1 ; SPAG8 ; HINT2 ; FAM221B ; TMEM8B ; RECK ; CLTA ; GLIPR2 ; ARHGEF39 ; CA9 ; CCDC107 ; LOC101926948 ; TESK1 ; RUSC2 ; UNC13B ; FAM214B ; FANCG ; C9orf131 ; DNAJB5 ; DNAJB5-AS1 ; ZCCHC7 ; FBXO10 ; EBLN3P ; MELK ; RNF38 ; FRMPD1 ; GNE ; TPM2 ; ENHO ; |
| BETA | TMEM8B ; SPAG8 ; OR13J1 ; LINC00961 ; FAM221B ; HRCT1 ; HINT2 ; LINC00950 ; OR2S2 ; |