SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_060200472
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr1:26993731-27011086
Size: 17355
Super-enhancer rank 472
Number of SE elements: 7
ChIP density(Case|Control): 28224.4365|4149.5805
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TRNP1;
ROSE Overlap TRNP1; FAM46B;
ROSE Proximal KDF1;
ROSE Closest TRNP1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200472 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers