SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200460
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr14:104966688-104974575
Size: 7887
Super-enhancer rank 460
Number of SE elements: 2
ChIP density(Case|Control): 27382.8753|3053.0577
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AHNAK2 ;
ROSE Overlap AHNAK2 ;
ROSE Proximal CDCA4 ; C14orf79 ; PLD4 ;
ROSE Closest AHNAK2 ;
Lasso PLD4 ; CDCA4 ; C14orf79 ;
PreSTIGE ;
ABC ;
BETA GPR132 ; CDCA4 ; C14orf79 ; PLD4 ; AHNAK2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200460 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers