SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200416
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr7:30284699-30324081
Size: 39382
Super-enhancer rank 416
Number of SE elements: 7
ChIP density(Case|Control): 32159.3412|6722.5074
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR550B1 ;
ROSE Overlap MIR550A1 ; ZNRF2 ; MIR550B1 ;
ROSE Proximal DKFZP586I1420 ;
ROSE Closest MIR550B1 ;
Lasso ;
PreSTIGE ;
ABC LOC105375218 ; ZNRF2 ;
BETA DKFZP586I1420 ; ZNRF2 ; LINC01176 ; MIR550B1 ; MIR550A1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200416 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers