SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200368
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr20:17965048-17974170
Size: 9122
Super-enhancer rank 368
Number of SE elements: 1
ChIP density(Case|Control): 29534.2994|2503.989
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNX5 ;
ROSE Overlap SNX5 ; MGME1 ;
ROSE Proximal MGME1 ; SNORD17 ;
ROSE Closest SNX5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNORD17 ; MGME1 ; SNX5 ; OVOL2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200368 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers