SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200326
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr14:61499027-61586573
Size: 87546
Super-enhancer rank 326
Number of SE elements: 19
ChIP density(Case|Control): 40297.4238|11696.1456
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC101927780 ;
ROSE Overlap LOC101927780 ; FLJ22447 ; PRKCH ;
ROSE Proximal ;
ROSE Closest LOC101927780 ;
Lasso ;
PreSTIGE ;
ABC SLC38A6 ; TRMT5 ; SIX1 ; PPM1A ; DHRS7 ; RTN1 ; PRKCH ; SIX4 ; MNAT1 ;
BETA LOC101927780 ; FLJ22447 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200326 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers