SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200322
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr14:64107771-64120390
Size: 12619
Super-enhancer rank 322
Number of SE elements: 4
ChIP density(Case|Control): 30548.0752|1860.0406
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR548H1 ;
ROSE Overlap SYNE2 ;
ROSE Proximal MIR548H1 ;
ROSE Closest MIR548H1 ;
Lasso ;
PreSTIGE ;
ABC WDR89 ;
BETA MIR548H1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200322 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers