SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200319
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr10:47985335-47993821
Size: 8486
Super-enhancer rank 319
Number of SE elements: 4
ChIP density(Case|Control): 30788.9052|2020.5166
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FRMPD2 ;
ROSE Overlap ;
ROSE Proximal CTGLF12P ;
ROSE Closest CTGLF12P ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FAM25G ; NPY4R ; LOC100996758 ; FAM25C ; CTGLF12P ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200319 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers