SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_060200238
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr18:9608881-9659394
Size: 50513
Super-enhancer rank 238
Number of SE elements: 7
ChIP density(Case|Control): 39127.3698|6687.9212
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP4R1-AS1;
ROSE Overlap PPP4R1-AS1; PPP4R1;
ROSE Proximal RAB31;
ROSE Closest PPP4R1-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200238 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers