SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200220
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr19:44738651-44776417
Size: 37766
Super-enhancer rank 220
Number of SE elements: 13
ChIP density(Case|Control): 43876.5388|10295.0116
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BCL3 ;
ROSE Overlap MIR8085 ; BCL3 ;
ROSE Proximal BCAM ; CEACAM16 ; CBLC ;
ROSE Closest MIR8085 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PVRL2 ; CBLC ; BCAM ; MIR8085 ; CEACAM19 ; BCL3 ; CEACAM16 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200220 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers