SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200213
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr6:25169280-25195208
Size: 25928
Super-enhancer rank 213
Number of SE elements: 4
ChIP density(Case|Control): 37201.4944|3277.2992
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CMAHP ;
ROSE Overlap ;
ROSE Proximal CMAHP ;
ROSE Closest CMAHP ;
Lasso ;
PreSTIGE ;
ABC CMAHP ; KIAA0319 ; ALDH5A1 ; GPLD1 ; RIPOR2 ; CARMIL1 ;
BETA LOC101928663 ; CMAHP ; LRRC16A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200213 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers