SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200212
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr7:105003554-105020553
Size: 16999
Super-enhancer rank 212
Number of SE elements: 4
ChIP density(Case|Control): 38067.5606|4064.4609
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KMT2E-AS1 ;
ROSE Overlap KMT2E ; KMT2E-AS1 ;
ROSE Proximal LINC01004 ;
ROSE Closest KMT2E-AS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC01004 ; KMT2E ; KMT2E-AS1 ; LHFPL3-AS2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200212 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers